Bulmash initializePoisson

Percentage Accurate: 100.0% → 100.0%
Time: 2.9s
Alternatives: 1
Speedup: 1.0×

Specification

?
\[\begin{array}{l} \\ \frac{NdChar}{1 + e^{\frac{-\left(\left(\left(Ec - Vef\right) - EDonor\right) - mu\right)}{KbT}}} + \frac{NaChar}{1 + e^{\frac{\left(\left(Ev + Vef\right) + EAccept\right) + \left(-mu\right)}{KbT}}} \end{array} \]
(FPCore (NdChar Ec Vef EDonor mu KbT NaChar Ev EAccept)
 :precision binary64
 (+
  (/ NdChar (+ 1.0 (exp (/ (- (- (- (- Ec Vef) EDonor) mu)) KbT))))
  (/ NaChar (+ 1.0 (exp (/ (+ (+ (+ Ev Vef) EAccept) (- mu)) KbT))))))
double code(double NdChar, double Ec, double Vef, double EDonor, double mu, double KbT, double NaChar, double Ev, double EAccept) {
	return (NdChar / (1.0 + exp((-(((Ec - Vef) - EDonor) - mu) / KbT)))) + (NaChar / (1.0 + exp(((((Ev + Vef) + EAccept) + -mu) / KbT))));
}

real(8) function code(ndchar, ec, vef, edonor, mu, kbt, nachar, ev, eaccept)
    real(8), intent (in) :: ndchar
    real(8), intent (in) :: ec
    real(8), intent (in) :: vef
    real(8), intent (in) :: edonor
    real(8), intent (in) :: mu
    real(8), intent (in) :: kbt
    real(8), intent (in) :: nachar
    real(8), intent (in) :: ev
    real(8), intent (in) :: eaccept
    code = (ndchar / (1.0d0 + exp((-(((ec - vef) - edonor) - mu) / kbt)))) + (nachar / (1.0d0 + exp(((((ev + vef) + eaccept) + -mu) / kbt))))
end function

public static double code(double NdChar, double Ec, double Vef, double EDonor, double mu, double KbT, double NaChar, double Ev, double EAccept) {
	return (NdChar / (1.0 + Math.exp((-(((Ec - Vef) - EDonor) - mu) / KbT)))) + (NaChar / (1.0 + Math.exp(((((Ev + Vef) + EAccept) + -mu) / KbT))));
}

def code(NdChar, Ec, Vef, EDonor, mu, KbT, NaChar, Ev, EAccept):
	return (NdChar / (1.0 + math.exp((-(((Ec - Vef) - EDonor) - mu) / KbT)))) + (NaChar / (1.0 + math.exp(((((Ev + Vef) + EAccept) + -mu) / KbT))))

function code(NdChar, Ec, Vef, EDonor, mu, KbT, NaChar, Ev, EAccept)
	return Float64(Float64(NdChar / Float64(1.0 + exp(Float64(Float64(-Float64(Float64(Float64(Ec - Vef) - EDonor) - mu)) / KbT)))) + Float64(NaChar / Float64(1.0 + exp(Float64(Float64(Float64(Float64(Ev + Vef) + EAccept) + Float64(-mu)) / KbT)))))
end

function tmp = code(NdChar, Ec, Vef, EDonor, mu, KbT, NaChar, Ev, EAccept)
	tmp = (NdChar / (1.0 + exp((-(((Ec - Vef) - EDonor) - mu) / KbT)))) + (NaChar / (1.0 + exp(((((Ev + Vef) + EAccept) + -mu) / KbT))));
end

code[NdChar_, Ec_, Vef_, EDonor_, mu_, KbT_, NaChar_, Ev_, EAccept_] := N[(N[(NdChar / N[(1.0 + N[Exp[N[((-N[(N[(N[(Ec - Vef), $MachinePrecision] - EDonor), $MachinePrecision] - mu), $MachinePrecision]) / KbT), $MachinePrecision]], $MachinePrecision]), $MachinePrecision]), $MachinePrecision] + N[(NaChar / N[(1.0 + N[Exp[N[(N[(N[(N[(Ev + Vef), $MachinePrecision] + EAccept), $MachinePrecision] + (-mu)), $MachinePrecision] / KbT), $MachinePrecision]], $MachinePrecision]), $MachinePrecision]), $MachinePrecision]), $MachinePrecision]

\begin{array}{l}

\\
\frac{NdChar}{1 + e^{\frac{-\left(\left(\left(Ec - Vef\right) - EDonor\right) - mu\right)}{KbT}}} + \frac{NaChar}{1 + e^{\frac{\left(\left(Ev + Vef\right) + EAccept\right) + \left(-mu\right)}{KbT}}}
\end{array}

Sampling outcomes in binary64 precision:

Local Percentage Accuracy vs ?

The average percentage accuracy by input value. Horizontal axis shows value of an input variable; the variable is choosen in the title. Vertical axis is accuracy; higher is better. Red represent the original program, while blue represents Herbie's suggestion. These can be toggled with buttons below the plot. The line is an average while dots represent individual samples.

Accuracy vs Speed?

Herbie found 1 alternatives:

AlternativeAccuracySpeedup
The accuracy (vertical axis) and speed (horizontal axis) of each alternatives. Up and to the right is better. The red square shows the initial program, and each blue circle shows an alternative.The line shows the best available speed-accuracy tradeoffs.

Initial Program: 100.0% accurate, 1.0× speedup?

\[\begin{array}{l} \\ \frac{NdChar}{1 + e^{\frac{-\left(\left(\left(Ec - Vef\right) - EDonor\right) - mu\right)}{KbT}}} + \frac{NaChar}{1 + e^{\frac{\left(\left(Ev + Vef\right) + EAccept\right) + \left(-mu\right)}{KbT}}} \end{array} \]
(FPCore (NdChar Ec Vef EDonor mu KbT NaChar Ev EAccept)
 :precision binary64
 (+
  (/ NdChar (+ 1.0 (exp (/ (- (- (- (- Ec Vef) EDonor) mu)) KbT))))
  (/ NaChar (+ 1.0 (exp (/ (+ (+ (+ Ev Vef) EAccept) (- mu)) KbT))))))
double code(double NdChar, double Ec, double Vef, double EDonor, double mu, double KbT, double NaChar, double Ev, double EAccept) {
	return (NdChar / (1.0 + exp((-(((Ec - Vef) - EDonor) - mu) / KbT)))) + (NaChar / (1.0 + exp(((((Ev + Vef) + EAccept) + -mu) / KbT))));
}

real(8) function code(ndchar, ec, vef, edonor, mu, kbt, nachar, ev, eaccept)
    real(8), intent (in) :: ndchar
    real(8), intent (in) :: ec
    real(8), intent (in) :: vef
    real(8), intent (in) :: edonor
    real(8), intent (in) :: mu
    real(8), intent (in) :: kbt
    real(8), intent (in) :: nachar
    real(8), intent (in) :: ev
    real(8), intent (in) :: eaccept
    code = (ndchar / (1.0d0 + exp((-(((ec - vef) - edonor) - mu) / kbt)))) + (nachar / (1.0d0 + exp(((((ev + vef) + eaccept) + -mu) / kbt))))
end function

public static double code(double NdChar, double Ec, double Vef, double EDonor, double mu, double KbT, double NaChar, double Ev, double EAccept) {
	return (NdChar / (1.0 + Math.exp((-(((Ec - Vef) - EDonor) - mu) / KbT)))) + (NaChar / (1.0 + Math.exp(((((Ev + Vef) + EAccept) + -mu) / KbT))));
}

def code(NdChar, Ec, Vef, EDonor, mu, KbT, NaChar, Ev, EAccept):
	return (NdChar / (1.0 + math.exp((-(((Ec - Vef) - EDonor) - mu) / KbT)))) + (NaChar / (1.0 + math.exp(((((Ev + Vef) + EAccept) + -mu) / KbT))))

function code(NdChar, Ec, Vef, EDonor, mu, KbT, NaChar, Ev, EAccept)
	return Float64(Float64(NdChar / Float64(1.0 + exp(Float64(Float64(-Float64(Float64(Float64(Ec - Vef) - EDonor) - mu)) / KbT)))) + Float64(NaChar / Float64(1.0 + exp(Float64(Float64(Float64(Float64(Ev + Vef) + EAccept) + Float64(-mu)) / KbT)))))
end

function tmp = code(NdChar, Ec, Vef, EDonor, mu, KbT, NaChar, Ev, EAccept)
	tmp = (NdChar / (1.0 + exp((-(((Ec - Vef) - EDonor) - mu) / KbT)))) + (NaChar / (1.0 + exp(((((Ev + Vef) + EAccept) + -mu) / KbT))));
end

code[NdChar_, Ec_, Vef_, EDonor_, mu_, KbT_, NaChar_, Ev_, EAccept_] := N[(N[(NdChar / N[(1.0 + N[Exp[N[((-N[(N[(N[(Ec - Vef), $MachinePrecision] - EDonor), $MachinePrecision] - mu), $MachinePrecision]) / KbT), $MachinePrecision]], $MachinePrecision]), $MachinePrecision]), $MachinePrecision] + N[(NaChar / N[(1.0 + N[Exp[N[(N[(N[(N[(Ev + Vef), $MachinePrecision] + EAccept), $MachinePrecision] + (-mu)), $MachinePrecision] / KbT), $MachinePrecision]], $MachinePrecision]), $MachinePrecision]), $MachinePrecision]), $MachinePrecision]

\begin{array}{l}

\\
\frac{NdChar}{1 + e^{\frac{-\left(\left(\left(Ec - Vef\right) - EDonor\right) - mu\right)}{KbT}}} + \frac{NaChar}{1 + e^{\frac{\left(\left(Ev + Vef\right) + EAccept\right) + \left(-mu\right)}{KbT}}}
\end{array}

Alternative 1: 100.0% accurate, 1.0× speedup?

\[\begin{array}{l} \\ \frac{NaChar}{e^{\frac{\left(EAccept + \left(Ev + Vef\right)\right) - mu}{KbT}} + 1} + \frac{NdChar}{e^{\frac{mu - \left(\left(Ec - Vef\right) - EDonor\right)}{KbT}} + 1} \end{array} \]
(FPCore (NdChar Ec Vef EDonor mu KbT NaChar Ev EAccept)
 :precision binary64
 (+
  (/ NaChar (+ (exp (/ (- (+ EAccept (+ Ev Vef)) mu) KbT)) 1.0))
  (/ NdChar (+ (exp (/ (- mu (- (- Ec Vef) EDonor)) KbT)) 1.0))))
double code(double NdChar, double Ec, double Vef, double EDonor, double mu, double KbT, double NaChar, double Ev, double EAccept) {
	return (NaChar / (exp((((EAccept + (Ev + Vef)) - mu) / KbT)) + 1.0)) + (NdChar / (exp(((mu - ((Ec - Vef) - EDonor)) / KbT)) + 1.0));
}

real(8) function code(ndchar, ec, vef, edonor, mu, kbt, nachar, ev, eaccept)
    real(8), intent (in) :: ndchar
    real(8), intent (in) :: ec
    real(8), intent (in) :: vef
    real(8), intent (in) :: edonor
    real(8), intent (in) :: mu
    real(8), intent (in) :: kbt
    real(8), intent (in) :: nachar
    real(8), intent (in) :: ev
    real(8), intent (in) :: eaccept
    code = (nachar / (exp((((eaccept + (ev + vef)) - mu) / kbt)) + 1.0d0)) + (ndchar / (exp(((mu - ((ec - vef) - edonor)) / kbt)) + 1.0d0))
end function

public static double code(double NdChar, double Ec, double Vef, double EDonor, double mu, double KbT, double NaChar, double Ev, double EAccept) {
	return (NaChar / (Math.exp((((EAccept + (Ev + Vef)) - mu) / KbT)) + 1.0)) + (NdChar / (Math.exp(((mu - ((Ec - Vef) - EDonor)) / KbT)) + 1.0));
}

def code(NdChar, Ec, Vef, EDonor, mu, KbT, NaChar, Ev, EAccept):
	return (NaChar / (math.exp((((EAccept + (Ev + Vef)) - mu) / KbT)) + 1.0)) + (NdChar / (math.exp(((mu - ((Ec - Vef) - EDonor)) / KbT)) + 1.0))

function code(NdChar, Ec, Vef, EDonor, mu, KbT, NaChar, Ev, EAccept)
	return Float64(Float64(NaChar / Float64(exp(Float64(Float64(Float64(EAccept + Float64(Ev + Vef)) - mu) / KbT)) + 1.0)) + Float64(NdChar / Float64(exp(Float64(Float64(mu - Float64(Float64(Ec - Vef) - EDonor)) / KbT)) + 1.0)))
end

function tmp = code(NdChar, Ec, Vef, EDonor, mu, KbT, NaChar, Ev, EAccept)
	tmp = (NaChar / (exp((((EAccept + (Ev + Vef)) - mu) / KbT)) + 1.0)) + (NdChar / (exp(((mu - ((Ec - Vef) - EDonor)) / KbT)) + 1.0));
end

code[NdChar_, Ec_, Vef_, EDonor_, mu_, KbT_, NaChar_, Ev_, EAccept_] := N[(N[(NaChar / N[(N[Exp[N[(N[(N[(EAccept + N[(Ev + Vef), $MachinePrecision]), $MachinePrecision] - mu), $MachinePrecision] / KbT), $MachinePrecision]], $MachinePrecision] + 1.0), $MachinePrecision]), $MachinePrecision] + N[(NdChar / N[(N[Exp[N[(N[(mu - N[(N[(Ec - Vef), $MachinePrecision] - EDonor), $MachinePrecision]), $MachinePrecision] / KbT), $MachinePrecision]], $MachinePrecision] + 1.0), $MachinePrecision]), $MachinePrecision]), $MachinePrecision]

\begin{array}{l}

\\
\frac{NaChar}{e^{\frac{\left(EAccept + \left(Ev + Vef\right)\right) - mu}{KbT}} + 1} + \frac{NdChar}{e^{\frac{mu - \left(\left(Ec - Vef\right) - EDonor\right)}{KbT}} + 1}
\end{array}
Derivation

  1. Initial program 100.0%

    \[\frac{NdChar}{1 + e^{\frac{-\left(\left(\left(Ec - Vef\right) - EDonor\right) - mu\right)}{KbT}}} + \frac{NaChar}{1 + e^{\frac{\left(\left(Ev + Vef\right) + EAccept\right) + \left(-mu\right)}{KbT}}} \]
  2. Add Preprocessing

  3. Final simplification100.0%

    \[\leadsto \frac{NaChar}{e^{\frac{\left(EAccept + \left(Ev + Vef\right)\right) - mu}{KbT}} + 1} + \frac{NdChar}{e^{\frac{mu - \left(\left(Ec - Vef\right) - EDonor\right)}{KbT}} + 1} \]
  4. Add Preprocessing

Reproduce

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herbie shell --seed 2024343 
(FPCore (NdChar Ec Vef EDonor mu KbT NaChar Ev EAccept)
  :name "Bulmash initializePoisson"
  :precision binary64
  (+ (/ NdChar (+ 1.0 (exp (/ (- (- (- (- Ec Vef) EDonor) mu)) KbT)))) (/ NaChar (+ 1.0 (exp (/ (+ (+ (+ Ev Vef) EAccept) (- mu)) KbT))))))